HXB2, consensus, and founder alignment

Full-genome alignment of HXB2, consensus sequence, and DEMB11US006 (founder)

Usage

hxb2_cons_founder

Format

hxb2_cons_founder

An ape DNAbin object with 3 DNA sequences of length 1563 including the full-genome sequence for HXB2, the consensus sequence, and DEMB11US006 (founder)

Source

HXB2 and consensus (1st 2 sequences): https://www.hiv.lanl.gov/content/sequence/NEWALIGN/align.html Founder: https://www.sciencedirect.com/science/article/pii/S0022175914000143?via%3Dihub https://www.hiv.lanl.gov/components/sequence/HIV/asearch/query_one.comp?se_id=KC473833